PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco000436.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family WRKY
Protein Properties Length: 500aa    MW: 53546.5 Da    PI: 7.3574
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco000436.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.95.5e-30236295159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dg++WrKYGqK  kg+++pr+YYrCt a  Cpv+k+v+r+aed +++++tYeg+Hnh+
  Aco000436.1 236 MNDGCQWRKYGQKISKGNPCPRAYYRCTVApACPVRKQVQRCAEDMSILITTYEGTHNHP 295
                  58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-31221295IPR003657WRKY domain
SuperFamilySSF1182901.31E-26229296IPR003657WRKY domain
PROSITE profilePS5081127.198231297IPR003657WRKY domain
SMARTSM007748.6E-36236296IPR003657WRKY domain
PfamPF031062.6E-26237295IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MEVVMMRKAE EFIFEAHEEI GKDEKWLLQL GNRTPIAERG FTRSPSLTER ESSISMQAQR  60
LEATKAEMGE VREENERLKM LLARIVEDYK SLQSQFSNLI QQERGKTPVA SPTDINDFHE  120
PELVSLRLGP SSSTHEREEK LSANKKRGED HDGGGLSLAL ERKFEGSRNG TNEVPTLNLS  180
SENSFEDTKE QEAGEPWPPS KIHKNNVRND DDEVSQQLQV KKARVSVRAR CDTPTMNDGC  240
QWRKYGQKIS KGNPCPRAYY RCTVAPACPV RKQVQRCAED MSILITTYEG THNHPLAASA  300
TAMASTTSAA ATMLVHGAAT SSAAASAAAA LHGVSGYPSP RHFYLPNPTI SSNPSYPTIT  360
LDLTQPFDSA RVSSPLGLAL SGKGSNALGA SWGNNSGYSN QAAYSTLYQS SYLHRGAANP  420
SAGAAATETI ARAITADPSF RSALAAAITS YVGGGEGGAA VRLGEYMGAA GEGGAGAQNG  480
SSLGFLRHSL GFPSSRSGK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-20223296173WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008809713.11e-150PREDICTED: probable WRKY transcription factor 72
SwissprotQ9LXG84e-93WRK72_ARATH; Probable WRKY transcription factor 72
TrEMBLA0A0E0DWS81e-114A0A0E0DWS8_9ORYZ; Uncharacterized protein
STRINGOB06G12770.11e-107(Oryza brachyantha)
STRINGSi006217m1e-107(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-75WRKY DNA-binding protein 72